Journal of Threatened Taxa |
www.threatenedtaxa.org | 26 June 2023 | 15(6): 23382–23396
ISSN 0974-7907
(Online) | ISSN 0974-7893 (Print)
https://doi.org/10.11609/jott.8168.15.6.23382-23396
#8168 | Received 30
August 2022 | Final received 14 March 2023 | Finally accepted 10 May 2023
Identification and phylogenetic
analysis of various termite species distributed across southern Haryana, India
Bhanupriya 1, Shubhankar
Mukherjee 2, Nidhi Kakkar 3 & Sanjeev K. Gupta 4
1,3,4 Department of Zoology, 2 Department
of Biochemistry,
The Institute of Integrated and
Honors studies (IIHS), Kurukshetra University, Kurukshetra, Haryana 136119,
India.
1 bhanupriya46914@gmail.com
(corresponding author), 2 shubhankar.iihs@kuk.ac.in, 3 nidhikakkar12@yahoo.com,
4 skgupta@kuk.ac.in
Editor: Mandar Paingankar, Government Science College Gadchiroli,
Maharashtra, India. Date
of publication: 26 June 2023 (online & print)
Citation: Bhanupriya, S. Mukherjee,
N. Kakkar & S.K. Gupta (2023). Identification and phylogenetic
analysis of various termite species distributed across southern Haryana, India. Journal of Threatened Taxa 15(6): 23382–23396. https://doi.org/10.11609/jott.8168.15.6.23382-23396
Copyright: © Bhanupriya et al. 2023. Creative Commons Attribution 4.0
International License. JoTT allows unrestricted use, reproduction, and
distribution of this article in any medium by providing adequate credit to the
author(s) and the source of publication.
Funding: UGC-CSIR JRF.
Competing interests: The authors declare no competing interests.
Author details: Bhanupriya is presently working on Diversity and Phylogeny of Termite Species (Insecta: Isoptera) in southern Haryana as part of PhD research.
Dr. Shubhankar Mukherjee, an assistant professor, has published dozens of papers in the reputed journals. His field of research includes plant molecular biology, biotechnology and physiology, and molecular evolution. Dr. Nidhi Kakkar, a research associate, has published dozens of papers in the national and international journals and a book chapter on termite gut microbes. Her field of research includes biodiversity and entomology. Dr. Sanjeev K. Gupta, a
professor, has published dozens of papers in the national and international journals and few book chapters. His field of research includes cell biology and biodiversity.
Author contributions: All authors contributed to the idea and design of this manuscript. Literature explorations, data study, and first manuscript draft were done by Bhanupriya. The final manuscript was revised, edited and approved by all authors.
Acknowledgements: The authors are grateful to
Biotechnology Department, Institute of Integrated & Honors
Studies (IIHS), Kurukshetra University, Kurukshetra, for providing space and
equipment to carry out the research work. The first author is highly indebted
to the University Grants Commission (UGC) for granting the financial support
under the Junior Research Fellowship (JRF) scheme. Bioserve
Biotechnologies (INDIA) Pvt Ltd, a reprocell company,
Hyderabad also deserve special thanks for carrying out the sequencing of
termite samples.
Abstract: Termites are highly abundant and
vital insects that directly and indirectly influence local soils. The present
study investigated the morphological and molecular phylogenetics of termite
species collected from study fields in southern Haryana, India, from 2020 to
2021. Samples were subjected to integrated systematic analyses, taking into
account the mandible features of soldiers for morphological systematics and 16S
rRNA gene-based phylogeny for molecular systematics. Based on the external
phenotype and relations to reference sequences in NCBI GenBank, 21 species were
identified; these included five species each from Odontotermes
and Microcerotermes, four species from Coptotermes, two species each from Microtermes and Eremotermes,
and one species each from Amitermes, Angulitermes, and Neotermes.
16S rRNA gene sequences were utilized to construct phylogenetic trees to
explore the relatedness among identified species. The results of the different
molecular phylogenetic approaches including maximum parsimony, maximum
likelihood, and neighbor-joining revealed nearly identical topological
relations between the species and grouping of individuals in relation to their
genera. The maximum parsimony tree based on mandible features has been found to
be effective in clustering multiple species of a given genus in a clade in at
least three termite genera.
Keywords: 16S rRNA gene, Kalotermitidae, mandible, molecular analysis, morphological
taxonomy, phylogenetic tree, Rhinotermitidae, Termitidae.
Introduction
Isopterans are one of the most
significant insect groups, serving as key decomposers of wood and other
materials, and termites can also be serious pests of wood and other crops (Bignell & Eggleton 2000;
Ackerman et al. 2007; Pooja et al. 2017; Govorushko 2019;
Korb et al. 2019). Termites are eusocial insects,
with colonies exhibiting caste specialization and division of labour. Around 3,106 species are listed worldwide, of which
337 have been reported from India and 39 from Haryana State (Bignell et al. 2010; Krishna et al. 2013; Pooja et al.
2017; Paul et al. 2018; Effowe et al. 2021; Bhanupriya et al. 2022a,b). Since termites are highly
diverse it is important to identify them properly and classify them into
well-defined groups, typically via multiple approaches.
Classical systematics has been
used to classify termite species using morphological features of worker and
soldier castes (Donovan et al. 2000; Aldrich et al. 2007; Rocha et al. 2019),
which is useful to the genus level. To accurately discern species, a
combination of molecular and morphological approaches have proven useful (Wallman & Donnellan 2001; Austin et al. 2005; Yeap et al. 2007), especially in cases where only partial
or damaged samples are available (Judith & Nicola 2008). Molecular systematics
based on mitochondrial DNA sequences has proven especially effective in
unravelling termite taxonomy (Wells & Sperling 2001; Roy et al. 2006).
Studies have been carried out using a variety of mitochondrial genes, including those for
cytochrome oxidases and ribosomal RNAs (e.g., 12S and 16S rRNA; Murthy 2020).
Mitochondrial genes tend to vary more rapidly than those in nuclear DNA, and
they are inherited maternally (Behura 2006). 16S
rRNA-based trees have been used to understand the taxonomy and evolution of
termite species (Kambhampati et al. 1996; Vidyashree et al. 2018).
The present study was designed to
characterize termite species collected from southern Haryana, India, based on
morphological and molecular data. Termites were classified using phylogenetic
trees built on the basis of 16S rRNA gene sequences, and maximum parsimony
trees based on soldier mandible features. The results of molecular
identification and morphological assessments are compared.
Methods
and Methods
Collection of Termite Samples
A total of 168 termite samples
(soldiers and workers) were collected from several localities of southern
Haryana, India, situated between 28.25° N & 76.29° E during a 2-year study
period (Table 1; Figure 1), via random sampling (Bhanupriya
et al. 2022a,b) of microhabitats that included dung cakes, common rush,
vegetation, leaf litter, tree bark, stumps, mounds, bamboo fencing and tree
logs. Collections were completed at three-month intervals from March 2020 to
November 2021. Each sample contained around 50 individuals and their
distribution in study sites was mapped based on the collective data of the
current study. The voucher specimens were well-maintained in 10ml of 70%
ethanol mixed with 2–3 drops of glycerol in 20 ml glass vials for morphological
and molecular analysis. Samples kept in the vials were labeled with the day and
date of collection, name of the study sites and source of isolation, and
retained in the Department of Zoology, IIHS, Kurukshetra University,
Kurukshetra, India.
Morphological identification of
termite species
Identification of specimens was
done using identification keys (Roonwal & Chhotani 1989; Chhotani 1997;
Krishna et al. 2013) based upon different diagnostic characteristics of soldier
caste: head length, head width, head shape, mandible length, mandible plus head
length, body length, body width, body-colour, tibial
spur, tarsal segments and antennae segments (Wang et al. 2009; Bhanupriya et al. 2022a,b). These measurements were
examined under the light compound microscope and photographs were also
collected. And complete analysis of body measurements was performed by
calculating mean and SD.
Parsimony tree based on mandible
features
For construction of parsimony
tree based on mandible characters, observations were made on features like
mandible without a tooth, mandible with serrations, serrated mandibles without
any large tooth, mandibles strongly incurved at distal half, mandible with
incurved apex, cylindrical mandibles, tooth present at mid of the mandible,
tooth present at the near tip of the mandible, tooth present at near base of
the mandible, left mandible with a single tooth, right mandible with a single
tooth, left mandible with six marginal teeth, right mandible with two teeth,
left mandible with four crenulations, right mandible with two crenulations,
right mandible with three crenulations and right mandible with four
crenulations. The presence and absence of the above mentioned characters were
assigned values of 1 and 0 respectively, and the strings of 1’s and 0’s were
used as vectors to define a particular termite species. Maximum parsimony tree
was constructed based on these strings of 1’s and 0’s using PAST 4.10 software.
Molecular
identification
Extraction of Genomic DNA, PCR
and Sequencing
The genomic DNA of termites was
isolated from worker castes using Qiagen mini kits as per manufacturer
instructions. The polymerase chain reaction was conducted using 16S rRNA
gene-specific forward and reverse primers (16SF 5’-CGCCTGTTTATCAAAAACAT-3’ 16SR
5’- CCGGTCTGAACTCAGATCACGT-3’) by the protocol of Szalanski
et al. (2004) with some modifications. Approximately, 500 bps amplicon of 16S
rRNA gene was obtained for each termite species. The PCR reaction was performed
in 0.2 ml of PCR tubes with a 25 µl reaction mixture consisting of 5 µl genomic
DNA, 12.5 µl PCR mix, 1.0 µl primers (16SF & 16SR), and 6.5 µl of
nuclease-free water. The PCR reactions were repeated in thermal cycles 40
times. In thermal cycles initial denaturation occurred at 95⁰ C for 5 minutes,
denaturation, annealing, and extension at 94⁰ C, 55⁰ C, and 72⁰ C,
respectively, for 30 seconds each, followed by final extension at 72⁰ C for 7
minutes. The sequence of amplified DNA segments was approved using both the
primers using Applied Biosystems BigDye Terminator
V3.1 Cycle Sequencing kit. These sequences were further copied and analyzed
using ChromasPro v 1.34.
Data Analysis
The 16S rRNA gene sequences were
assembled using ChromasProV3.1 sequence assembly software. The assembled
sequences were edited to remove uncertain bases and revised sequences were
subjected to BLAST analysis in the NCBI database, for molecular identification.
Since these were partial sequences, the overall identification of termites
relied on both molecular as well as morphological characters. Hereafter, these
16S rRNA gene sequences were submitted to NCBI to get the accession numbers
(Table 1). The 21 sequences were aligned using MAFFT (Katoh
et al. 2019) and trimmed and edited in Jalview
(Procter et al. 2021). Cryptocercus
(cockroach) mtDNA sequences were included to be used
as the outgroups. To explore the genetic relatedness of given termite species,
phylogenetic (NJ, ML and MP) trees were constructed using the PHYLIP package
version 3.695 (Felsenstein 2008).
500 replicates of the DNA
sequence alignment were generated using Seqboot. For
constructing MP tree, the output of Seqboot was fed
to the program Dnapars and the resultant MP trees
were obtained. The majority rule consensus tree was built from MP trees using Consense program. For constructing ML tree, the output of Seqboot was fed to the program Dnaml
and ML trees were obtained from the datasets which were fed to Consense to arrive at majority rule consensus ML Tree. For
constructing NJ tree, the output of Seqboot was fed
to the program Dnadist to compute the distance
matrices for the given datasets. The output of Dnadist
was fed to the program Neighbor to obtain the NJ trees from the given datasets.
The output of Neighbor was fed to Consense to
construct the majority rule consensus NJ tree.
Results
and Discussion
Taxonomic Account of Termites:
Based on aforementioned
morphological keys, 168 termite samples were identified into 21 species (Image
1) belonging to three families (Termitidae, Rhinotermitidae, and Kalotermitidae),
four subfamilies (Amitermitinae, Termitinae,
Macrotermitinae, and Coptotermitinae)
and eight genera (Amitermes, Eremotermes, Microcerotermes,
Angulitermes, Odontotermes,
Microtermes, Coptotermes,
and Neotermes) as shown in Table 2.
Species M. baluchistanicus is an
arid zone species that is restricted to only Rajasthan (Rathore &
Bhattacharyya 2004). Parihar (1981) reported that this species destroyed the
guar crop. In the Nuh region of Haryana, M. baluchistanicus has been discovered for the first
time.
Morphological tree
Investigation of the intra and
intergenic relatedness in termites was carried out on the basis of mandible features
of soldier castes by using parsimony analysis (Image 1). The mouthparts
(mandibles) of termites are sclerotized structures that are adapted according
to the substrate on which they feed. These adaptations are helpful for
mechanically breaking down the hardwood substrates of their diet (Wilson &
Jessica 2019). Therefore, mandibles are significantly important in feeding
biology, i.e., pulling, cutting, scraping, pounding, and grinding the wooden
structures (Matsuoka et al. 1996; Wilson & Jessica 2019).
As termites are cryptic species,
hence for identification, soldiers’ mandible features were counted as a
valuable or noticeable parameter for their characterization (Donovan et al.
2000; Engel et al. 2009). This is also because of the higher range of disparity
displayed by soldier caste in their conspicuous morphological characters
associated with the head and mandibles compared to either the alate or worker castes (Ishikawa et al. 2008; Wang et
al. 2009; Ahmed et al. 2011; Ke et al.
2017). Wang et al. (2009) identified five species of the genus Reticulitermes (R. flavipes,
R. virginicus, R. arenincola,
R. tibialis, and R. hageni) by
utilizing soldiers and alates body features. One
species, i.e., Heterotermes indicola (Mahapatro &
Kumar 2013), two species of the genus Neotermes
(N. koshunensis and N. sugioi)
(Yashiro et al. 2019) and seven species of three genera (Odontotermes,
Macrotermes, and Microtermes)
(Kassaye et al. 2021) were also identified with
soldiers and Imago’s morphological features. Vidyashree et
al. (2018) also utilized soldiers’ features and characterized 12 species
of termites from the Western Ghats of Karnataka, India.
In earlier phylogenetic studies,
imago-worker’s mandible characters were utilized for parsimony analysis.
However, this usually resulted in inconsistencies in the results, which were
more apparent in the family Termitidae (Ahmad 1950).
Similarly, mandibular forms seem to have changed numerous times with
modifications in feeding strategies like in the case of the Nasutitermes
group (Donovan et al. 2000; Chiu et al. 2018; Govorushko
2019). Hence, traditional morphological phylogenies are difficult to rely upon
always, since they have been built on restricted subsets of characters, e.g.,
the mandibles of worker-imago caste (Ahmad 1950) and the worker gut (Johnson
1979; Noirot 1995; Donovan et al. 2001). Rocha et al.
(2017) also had the same view that workers’ mandible characters alone are not
good enough as phylogenetic markers. But according to Carrijo
et al. (2020) termite species can be easily identified with the combination of
the soldier as well as worker caste characters, as they showed in the
classification of Heterotermes longiceps species.
Termites can also be classified
on the basis of soldier’s mandibles into different types of defense categories
including Biting/Crushing, Slashing (Rhinotermitidae,
Serritermitidae, and Termitidae),
Slashing/ Snapping, Symmetrical Snapping (Termes,
Cavitermes, Homallotermes, Dentispicotermes, and Orthognathotermes),
Asymmetrical Snapping (Capritermes and Neocapritermes), Piercing (Amitermes,
Armitermes, Rhynchotermes, and Rhinotermes), Vestigial (Nasutitermitinae
and Rhinotermitidae), Ejected Secretion (Nasutitermes) and Vestigial Labral Brush (Acorhinotermes) (Prestwich 1984). But Rocha et al.
(2017) reconstructed the classification of termites into three categories
(biting/crushing, piercing and slashing) based on their defense behavior.
In the present study, the
importance of mandibular features in soldiers was investigated in determining
the taxonomy of termite species. The soldier caste is the main caste on which
consistent amount of termite taxonomic work has been focused (Seid et al. 2008; Kuan et al.
2020; Amina et al. 2020). The MP tree based on mandible features exhibited
certain clusters which were consistent with the DNA based tree, as it can be
observed that the species of Microcerotermes,
Odontotermes, and Coptotermes
are falling in their respective clades with significant bootstrap values (Figure
2); earlier investigators have also emphasized on the importance of mandible
features in the determination of taxonomic position of different termite
species (Donovan et al. 2000; Carrijo et al.
2020). So, the tree based on mandible features though not completely defined
the relationship between different termite families, but at genus level, proper
clustering of three genera was obtained. First cluster comprised species of
genus Coptotermes (C. kishori,
C. heimi, C. gestroi, and C.
emersoni), second comprised Odontotermes species
(O. obesus, O. assmuthi, and O.
redemanni) and the third comprised species of the
genus Microcerotermes (M. beesoni, M. baluchistanicus, and M.
cameroni). The clustering of rest of the species
included in our study was chiefly dependent on the morphometric features.
Rocha et al. (2017) also notified
such anomalies when he reported that, based on head morphology, Rhynchotermes nasutissimus and
Uncitermes teevani came
closer, though, phylogenetically, U. teevani is
closer to Labiotermes labralis. Inward et al. (2007) commented that the
defense morphologies in termites vary from species to species and evolved
autonomously among all Isopterans. Similarly, Hare (1937) stated that soldiers
of a few genera—Microcerotermes, Termes, and Nasutitermes (Termitidae)—lack a marginal tooth in their mandibles, while
in some others, including Amitermes, Eremotermes, and Odontotermes, a distinct tooth is present at the edge
of the soldier mandible (Chhotani 1997). Such
observations point to the fact that there might have been a convergent
evolution in the case of mandible features where similarities are indicative
more of similar defense behavior and other habits rather than phylogenetic.
Molecular
Identification
Sequence analysis
About 500 bps of PCR products of
16S rRNA gene were sequenced for 21 species. These sequences were
BLAST-searched in NCBI databases to determine the identity of termite samples.
The sequences of these 21 species were deposited to the NCBI GenBank and the
accession number of each termite species was obtained (Table 1).
Nucleotide-composition analysis
The nucleotide composition in the
mt16S rRNA gene fragment was calculated for the 21 termite species using MEGA11
software (Tamura et al. 2021). It exhibited considerably high
frequencies of A+T base composition that ranged from 61.08 to 68.56% compared
to G+C composition (31.44–38.92 %). These nucleotide arrangements showed bias
towards adenine and thymine in their composition which is consistent with data
on 16S rRNA mitochondrial gene studies in various insects (Kambhampati
et al. 1996; Vidyashree et al. 2018). The
individual nucleotide frequencies for each species have been plotted in
Supplementary Figure S3. High AT frequencies have also been reported by other
groups like Kambhampati et al. (1996); Vidyashree et al. (2018), Austin et al. (2002),
Ohkuma et al. (2004), and Murthy (2020).
The entire gene analysis of
investigated termite species was done using the maximum composite likelihood
(MCL) estimates method. The MCL estimates calculate the probability of
substitution of one base with another base (Tamura et al. 2021).
Substitution rates were assessed using MEGA11 (Tamura et al. 2021).
The rates of different transitional substitutions were 22.61, 18.08, 12.52, and
9.54, and the rates of transversional substitutions
were 6.75, 5.34, 3.69, and 2.85 (Table 3). The nucleotide frequencies were
found to be 36.24% (A), 28.65% (T), 19.84% (C), and 15.28% (G), respectively.
The transition and transversion rate ratios were obtained as k1 =
3.35 (purines) and k2 = 3.388 (pyrimidines). The overall
transition/transversion bias (R) came out to be 1.513, where R =
[A*G*k1 + T*C*k2]/[(A+G)*(T+C)].
Distance analysis
Based on sequence alignment, the
divergence was calculated to investigate the intergenic variations among
termite species by using MEGA11 software. The sequences of 16S rRNA gene from
the termite species under this study were used to calculate pairwise genetic
distance values (Kimura 2 parameter) using MEGA11 (Table 4). The K2P distance
matrix values in species of the Odontotermes genus
ranged from 0.031 to 1.256. It was found to be lowest (0.031) between O.
redemanni and O. obesus and
highest (1.256) between O. parvidens and O.
obesus. The K2P interspecific distances in the
genus Coptotermes ranged
0.005–1.015, recorded maximum (1.015) between C. gestroi and C.
emersoni, and minimum (0.005) between C.
kishori and C. heimi.
However, divergence in genus Microcerotermes
was ranged highest (0.081) between M. raja and M. beesoni and lowest (0.0) between M. cameroni and M. newmani (Table
4).
Phylogenetic analysis
The molecular phylogenetic trees
were constructed from the aligned sequences of mt16S rRNA gene using maximum
likelihood (ML), neighbor-joining (NJ), and maximum parsimony (MP) methods
taking Cryptocercus mt
gene sequences as an outgroup. All the methods yielded highly similar results
and genetic relatedness between different termite species was established
(Figure 3, Supplementary Figures S1 & S2).
As evident in the maximum
parsimony tree, all the termite sequences are distinctly different from
the Cryptocercus sequences, which
cluster separately at the base of the tree. Amitermes
belli, C. gestroi, M. mycophagus, O. guptai, O.
parvidens, and O. assmuthi together
form a well-bootstrap value (500) supported clade (Clade A) in the MP tree as
well as in ML and NJ trees. Neotermes kemneri associates with this clade in both NJ and
ML trees, which could be indicative of relatedness between Neotermes kemneri and
various members of this clade. In clade A, species O. guptai, O. parvidens, O. assmuthi, M. mycophagus, and A.
belli, all belong to the same family Termitidae,
and C. gestroi belongs to the family
Rhinotermitidae; their clustering being strongly
supported by 100% bootstrap value. Our findings were broadly consistent with
those of Vidyashree et al. (2018) (based on
16S rRNA) who stated that the species of genera Microtermes and Odontotermes (belonging to family Termitidae and subfamily Macrotermitinae)
form a major cluster together as they showed higher resemblance with each other
on morphological basis.
The rest of the termite sequences
are clustered together in a large clade (Clade B) which is well supported with
bootstrap values in all the trees examined. This clade could be further
subdivided into two subclades, i.e., B1 and B2 with a 495.4 bootstrap value at
the node joining them. Subclade B1 having six members of two genera (Microcerotermes and Angulitermes)
that belong to the same family Termitidae,
i.e., Angulitermes akhorisainensis, M.
cameroni, M. newmani, M.
beesoni, M. raja, and M.
baluchistanicus. Species M. raja and M.
baluchistanicus are highly related with a
500 bootstrap value, while Angulitermes
akhorisainensis, M. cameroni, M.
newmani, and M. beesoni are
also clustered together at 499.7 bootstrap value. The same relationships are
observed in ML and NJ trees as well.
Subclade B2 having members,
i.e., E. paradoxalis, E. neoparadoxalis, O. obesus, O.
redemanni, M. obesi, C.
emersoni, C. kishori,
and C. heimi. Therefore, subclade B2
comprises species from three subfamilies (Amitermitinae,
Coptotermitinae, and Macrotermitinae)
and four genera (Eremotermes, Coptotermes, Odontotermes, and Microtermes) of two families, Termitidae
and Rhinotermitidae. B2 is further subdivided into
two sub-subclades, i.e., B2a and B2b. In the subclade B2a, E. paradoxalis and E. neoparadoxalis are
clustered together with 100% bootstrap value. However, in B2b, members of
two families named Rhinotermitidae and Termitidae clustered together with almost 42% bootstrap
value. Rhinotermitidae family is represented by
C. emersoni, C. kishori, and C.
heimi, whereas the Termitidae
family is represented by O. redemanni, O. obesus, and M. obesi. Species O.
obesus, O. redemanni,
and M. obesi could also be
considered related to each other since this clustering is common in both MP and
ML trees, and the cluster is well supported with bootstrap values in the ML
tree.
Species of genera Coptotermes, Odontotermes,
and Microtermes were clustered on separate
clades, i.e., A and B2. One possible explanation of this separate clustering
comes from the morphological features of the members of these two groups, which
differ in the location of tooth on the either side of mandibles and shape of
the head. In O. redemanni and O. obesus, mandibles are sickle shaped and head is oval
shaped. M. mycophagus possesses one tooth like
projection near the tip of the mandibles while M. obesi
don’t have tooth. O. obesus is always
found to cluster with the species M. obesi (Vidyashree et al. 2018), whereas, species of the
genus Microcerotermes of subfamily Amitermitinae tend to fall in a separate cluster
(Bourguignon et al. 2014; Vidyashree et al. 2018).
Findings from the present
investigation broadly validate the results of Thompson et al. (2000) and Ohkuma et al. (2004) who described Asian termite’s
phylogeny, based on COII gene, taking 31 genera of Termitidae
and Rhinotermitidae families.
The present work was designed to
study the morphology and carry out genetic analysis of different termite
species belonging to the family Termitidae, Rhinotermitidae and Kalotermitidae
based on the mt16S rRNA gene. This integrated analysis was done to solve the
problem that occurs in the identification of these puzzling species (Austin et
al. 2005, 2012; Yeap et al. 2007; Ke
et al. 2017; Ghesini et al. 2020). Significant
similarities were observed in certain cases regarding the clustering of
individual species in both the phylogenetic tree and the tree based on mandible
features, for example, species of genus Microcerotermes and Coptotermes formed separate clades in
mandible-based tree just like in the phylogenetic tree. Rhinotermitidae
family clustered distinctly from Termitidae which is
in equivalence with morphological identification (Vidyashree
et al. 2018).
Lee et al. (2005) also verified
morphological and phylogenetic analyses of Malaysian termites of the Termitidae family (Isoptera) with
COII gene sequence. The first few combined studies at both the molecular and
morphological levels between the major groups of isopterans were performed by
Lo et al. (2004) and Inward et al. (2007). Their analysis showed Kalotermitidae, Hodotermitidae
and Termitidae to be monophyletic, while Rhinotermitidae and Termopsidae
were found to be paraphyletic. This was further verified by Legendre et al.
(2008) using seven gene sequences (12S rDNA, 16S rDNA, 18S rDNA, 28S rDNA, COI,
COII, and cytb) establishing phylogenetic connections
between the termite species. Their findings revealed that the genera of Rhinotermitidae (Heterotermes,
Reticulitermes and Coptotermes)
forms a sister group with the Termitidae. Rhinotermititdae and Termitidae
members exhibited sister relations in our investigation as well (Figure 3;
Clade B). In another study, Rhinotermitidae family shared
paraphyletic relations with the family Termitidae
whereas Kalotermitidae was found to be monophyletic
with the Rhinotermitidae, Serritermitidae
and Termitidae (Bourguignon et al. 2014). In the
present research with limited members of termite species, members of Kalotermitidae, Rhinotermitidae
and Termitidae also showed common ancestry (Figure 3;
Clade A)
Overall, from our studies, it
could be concluded that morphological and molecular systematics both considered
together generates a better template for termite identification and
classification.
Table 1. Source of collection of termites,
geographical coordinates of the location, and GenBank accession numbers of the
sequenced 16S rRNA gene fragments.
|
|
Source of collection |
Latitude & Longitude |
Date of collection |
Molecular identity |
Accession No. |
|
1 |
Kikar tree |
28.12352 N 77.89224 E |
28.vi.2020 |
Amitermes belli |
MZ269706 |
|
2 |
Mango tree |
28.225932 N
77.082438 E |
24.iv.2020 |
Coptotermes gestroi |
OK606100 |
|
3 |
Woody thing |
28.226763 N
77.084916 E |
22.vi.2020 |
Microtermes mycophagus |
OK606129 |
|
4 |
Sheesam wood |
28.2288656 N
77.0883974 E |
23.vi.2020 |
Coptotermes kishori |
OL335912 |
|
5 |
Wood |
28.2287955 N
77.0885184 E |
23.vi.2020 |
Coptotermes heimi |
OK606090 |
|
6 |
Woody thing |
28.23808 N 77.04488
E |
25.vi.2020 |
Angulitermes akhorisainensis |
OL780326 |
|
7 |
Wood log |
28.2233547 N
77.0803697 E |
02.vi.2020 |
Eremotermes paradoxalis |
OL335913 |
|
8 |
Common rush |
28.39208 N 77.01185
E |
28.vi.2020 |
Microcerotermes newmani |
ON385997 |
|
9 |
Peepal tree |
28.39208 N 77.28196
E |
28.vi.2020 |
Coptotermes emersoni |
OK181907 |
|
10 |
Woody thing |
28.09059 N 77.01185
E |
30.viii.2021 |
Odontotermes obesus |
OL721750 |
|
11 |
Cattle dung |
27.45184 N 77.82596
E |
03.vii.2020 |
Eremotermes neoparadoxalis |
OL335910 |
|
12 |
Soil mound |
28.35496 N 77.2624
E |
11.vii.2020 |
Odontotermes redemanni |
OL454814 |
|
13 |
Wooden block |
28.22636 N 77.80092
E |
06.viii.2020 |
Odontotermes guptai |
OL335911 |
|
14 |
Common rush |
28.8804 N 77.4924 E |
17.iii.2021 |
Microcerotermes raja |
OL470522 |
|
15 |
Common rush |
28.3324 N 77.4812 E |
23.v.2021 |
Microcerotermes cameroni |
OL470529 |
|
16 |
Common rush |
28.0088 N 77.1048 E |
18.iii.2021 |
Microcerotermes baluchistanicus |
OL454819 |
|
17 |
woody logs |
28.3072 N 77.4848 E |
23.v.2021 |
Microtermes obesi |
OL454826 |
|
18 |
Kikar tree |
28.239467 N
77.051106 E |
29.viii.2021 |
Odontotermes parvidens |
OL454829 |
|
19 |
Sheesham tree |
28.201364 N
76.72994 E |
04.ix.2021 |
Neotermes kemneri |
OL780345 |
|
20 |
Kikar tree |
28.225001 N
76.545022 E |
04.ix.2021 |
Odontotermes assmuthi |
OL721753 |
|
21 |
Common rush |
28.325773 N
76.277785 E |
14.x.2021 |
Microcerotermes beesoni |
OM241964 |
Table 2. Body parameters of the soldier
castes of the studied termite species (n = 5).
|
|
TBL** |
HL |
HML |
ML |
HW |
BW |
Mandible features |
|
Amitermes belli |
5.02±0.24* |
1.13±0.11 |
1.9±0.14 |
0.77±0.08 |
1.18±0.26 |
1.04±0.12 |
single tooth on each mandible |
|
Coptotermes gestroi |
4.87±0.31 |
1.47±0.03 |
2.38±0.08 |
0.91±0.06 |
1.18±0.06 |
1.09±0.06 |
right mandible with 3
crenulations |
|
Microtermes mycophagus |
4.3±0.6 |
0.92±0.08 |
1.48±0.11 |
0.58±0.05 |
0.83±0.12 |
0.84±0.05 |
single tooth on each mandible |
|
Coptotermes kishori |
4.5±0.45 |
1.15±0.05 |
1.93±0.05 |
0.78±0.05 |
1.01±0.09 |
1.02±0.08 |
right mandible with 4 weaker
crenulations |
|
Coptotermes heimi |
5.58±0.42 |
1.33±0.05 |
2.14±0.20 |
0.82±0.16 |
1.18±0.08 |
1.04±0.04 |
right mandible with 4
crenulations |
|
Angulitermes akhorisainensis |
4.56±0.19 |
1.34±0.04 |
2.69±0.05 |
1.36±0.04 |
0.94±0.05 |
0.9±0.03 |
Mandibles long, rod like,
distally pointed and incurved |
|
Eremotermes paradoxalis |
3.84±0.24 |
0.95±0.08 |
1.76±0.15 |
0.81±0.07 |
0.68±0.07 |
0.72±0.08 |
single tooth on each mandible |
|
Microcerotermes beesoni |
4.8±0.4 |
1.32±0.13 |
2.13±0.2 |
0.81±0.12 |
0.84±0.12 |
0.82±0.08 |
finely serrated, a prominent
denticle present near the base of each mandible |
|
Coptotermes emersoni |
5.18±0.55 |
1.1±0.1 |
1.96±0.12 |
0.86±0.05 |
0.96±0.12 |
1.08±0.08 |
2 teeth on right mandible |
|
Odontotermes assmuthi |
5.64±0.4 |
1.57±0.12 |
2.3±0.16 |
0.75±0.07 |
1.21±0.05 |
1.18±0.08 |
Left mandible with single tooth |
|
Microcerotermes newmani |
4.56±0.4 |
1.2±0.13 |
2±0.2 |
0.8±0.12 |
0.9±0.12 |
0.8±0.08 |
coarsely serrated |
|
Eremotermes neoparadoxalis |
3.84±0.22 |
0.77±0.06 |
1.75±0.11 |
0.88±0.04 |
0.73±0.11 |
0.67±0.06 |
single tooth on each mandible |
|
Odontotermes redemanni |
4.64±0.41 |
1.21±0.07 |
1.92±0.15 |
0.79±0.07 |
1±0.1 |
0.87±0.05 |
Left mandible with single tooth |
|
Neotermes kemneri |
8.04±0.27 |
2.55±0.13 |
4.19±0.13 |
1.64±0.04 |
1.92±0.11 |
2.46±0.12 |
right mandible with 2 and left
with 6 teeth |
|
Odontotermes guptai |
4.92±0.08 |
1.04±0.12 |
1.64±0.18 |
0.6±0.08 |
0.95±0.05 |
0.91±0.06 |
Left mandible with single tooth |
|
Microcerotermes baluchistanicus |
4.72±0.58 |
1±0.07 |
1.96±0.05 |
0.96±0.05 |
0.67±0.08 |
0.88±0.08 |
coarsely serrated, with a
larger tooth-like serration in the middle |
|
Microcerotermes raja |
4.76±0.28 |
1.18±0.11 |
2.01±0.14 |
0.83±0.05 |
0.81±0.01 |
0.8±0.1 |
Coarsely serrated, without any
large tooth. |
|
Microcerotermes cameroni |
4.98±0.22 |
1.52±0.16 |
2.41±0.18 |
0.89±0.04 |
0.94±0.09 |
0.82±0.08 |
coarsely serrated with one
larger tooth-like serration near the middle |
|
Microtermes obesi |
4.3±0.35 |
0.98±0.08 |
1.52±0.09 |
0.54±0.04 |
0.83±0.08 |
0.88±0.08 |
single tooth on each mandible |
|
Odontotermes parvidens |
6±0.38 |
1.99±0.07 |
3.17±0.25 |
1.23±0.11 |
1.76±0.21 |
2.34±0.24 |
Left mandible with single tooth |
|
Odontotermes obesus |
5.14±0.70 |
1.32±0.13 |
2.2±0.16 |
0.88±0.11 |
1.15±0.05 |
1.14±0.09 |
Left mandible with single tooth |
*All values represented in mm |
**TBL—Total Body Length | HL—Head Length | HML—Head Mandible Length |
ML—Mandible Length | HW—Head Width | BW—Body Width.
Table 3. Maximum composite likelihood
estimates the pattern of nucleotide substitution.
|
|
A |
T |
C |
G |
|
A |
- |
5.34 |
3.69 |
9.54 |
|
T |
6.75 |
- |
12.52 |
2.85 |
|
C |
6.75 |
18.08 |
- |
2.85 |
|
G |
22.61 |
5.34 |
3.69 |
- |
* transitional substitutions were
22.61, 18.08, 12.52, and 9.54, and transversional
substitutions were 6.75, 5.34, 3.69, and 2.85.
Table 4. Pairwise genetic distances (Kimura
2-parameter) between species under study.
|
|
1* |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
17 |
18 |
19 |
20 |
21 |
|
1 |
- |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
2 |
0.173 |
- |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
3 |
0.219 |
0.176 |
- |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
4 |
1.128 |
0.830 |
1.106 |
- |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
5 |
1.166 |
0.839 |
1.138 |
0.005 |
- |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
6 |
0.974 |
0.715 |
0.96 |
0.145 |
0.151 |
- |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
7 |
1.078 |
0.836 |
1.066 |
0.167 |
0.171 |
0.134 |
- |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
8 |
0.943 |
0.719 |
0.983 |
0.143 |
0.137 |
0.013 |
0.123 |
- |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
9 |
1.268 |
1.015 |
1.36 |
0.014 |
0.033 |
0.166 |
0.2 |
0.160 |
- |
|
|
|
|
|
|
|
|
|
|
|
|
|
10 |
1.162 |
0.924 |
1.235 |
0.159 |
0.171 |
0.163 |
0.186 |
0.159 |
0.159 |
- |
|
|
|
|
|
|
|
|
|
|
|
|
11 |
0.941 |
0.72 |
0.965 |
0.138 |
0.136 |
0.007 |
0.123 |
0.014 |
0.161 |
0.156 |
- |
|
|
|
|
|
|
|
|
|
|
|
12 |
1.072 |
0.804 |
1.044 |
0.15 |
0.164 |
0.124 |
0.047 |
0.120 |
0.17 |
0.168 |
0.122 |
- |
|
|
|
|
|
|
|
|
|
|
13 |
1.305 |
0.43 |
1.23 |
0.128 |
0.121 |
0.114 |
0.128 |
0.107 |
0.128 |
0.031 |
0.114 |
0.13 |
- |
|
|
|
|
|
|
|
|
|
14 |
1.167 |
0.760 |
1.133 |
0.260 |
0.252 |
0.24 |
0.251 |
0.238 |
0.292 |
0.314 |
0.230 |
0.243 |
0.272 |
- |
|
|
|
|
|
|
|
|
15 |
0.151 |
0.145 |
0.23 |
1.193 |
1.144 |
0.984 |
1.181 |
1.047 |
1.318 |
1.21 |
1.04 |
1.127 |
1.21 |
1.257 |
- |
|
|
|
|
|
|
|
16 |
0.946 |
0.688 |
0.982 |
0.154 |
0.154 |
0.076 |
0.123 |
0.065 |
0.179 |
0.162 |
0.068 |
0.116 |
0.137 |
0.246 |
1.077 |
- |
|
|
|
|
|
|
17 |
0.991 |
0.669 |
0.965 |
0.167 |
0.166 |
0.087 |
0.134 |
0.081 |
0.197 |
0.12 |
0.078 |
0.133 |
0.178 |
0.244 |
1.129 |
0.025 |
- |
|
|
|
|
|
18 |
0.984 |
0.719 |
0.946 |
0.138 |
0.150 |
0.007 |
0.118 |
0.014 |
0.175 |
0.155 |
0.0 |
0.122 |
0.114 |
0.228 |
1.048 |
0.070 |
0.077 |
- |
|
|
|
|
19 |
1.089 |
0.798 |
1.111 |
0.165 |
0.158 |
0.135 |
0.188 |
0.145 |
0.173 |
0.140 |
0.143 |
0.154 |
0.135 |
0.229 |
1.103 |
0.142 |
0.16 |
0.144 |
- |
|
|
|
20 |
0.162 |
0.167 |
0.228 |
1.216 |
1.218 |
1.047 |
1.15 |
1.023 |
1.343 |
1.256 |
1.056 |
1.170 |
1.238 |
1.197 |
0.045 |
1.037 |
1.072 |
1.066 |
1.15 |
- |
|
|
21 |
0.144 |
0.187 |
0.227 |
1.17 |
1.190 |
1 |
1.125 |
0.985 |
1.288 |
1.167 |
1.00 |
1.125 |
1.216 |
1.182 |
0.062 |
1.016 |
1.055 |
1.031 |
1.105 |
0.041 |
- |
1—Amitermes
belli | 2—Coptotermes gestroi | 3—Microtermes
mycophagus | 4—Coptotermes
kishori | 5—Coptotermes
heimi | 6—Angulitermes
akhorisainensis | 7—Eremotermes
paradoxalis | 8—Microcerotermes
beesoni | 9—Coptotermes
emersoni | 10—Odontotermes
obesus | 11—Microcerotermes
newmani | 12—Eremotermes
neoparadoxalis | 13—Odontotermes
redemanni | 14—Neotermes
kemneri | 15—Odontotermes
guptai | 16—Microcerotermes
baluchistanicus | 17—Microcerotermes
raja | 18—Microcerotermes cameroni | 19—Microtermes
obesi | 20—Odontotermes
parvidens | 21—Odontotermes
assmuthi.
For
figures, images & supplementary files – click here for full PDF
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